Next: The View menu
Up: Order Parameter (Contact Model)
Previous: Parameters
  Contents
The results of an OPCM analysis are stored in a NetCDF file whose main variables are namely:
- time: the times in ps at which all the time-dependent OPCM defined in Eq. 4.199 is computed,
and for each protein chain name found in the system
- name_sequence: the residue numbers of the chain name,
- name_s2: the time-dependent generalized order parameter defined for each residue of chain
name as defined in Eq. 4.199,
- name_s2_timeavg: the time-averaged generalized order parameter defined for each residue of chain
name as defined in Eq. 4.200.
pellegrini eric
2009-10-06